SubtiBank SubtiBank
yhfE [2019-06-27 12:07:37]
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yhfE [2019-06-27 12:07:37]

similar to aminopeptidase
locus
BSU10200
pI
5.88
mw
38.58 kDa
protein length
346 aa Sequence Blast
gene length
1041 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,095,063 → 1,096,103

    The protein

    Protein family

  • Peptidase M42 family (with [protein|search|ysdc ]and [protein|16585F4118F3D2732D6780D351B7AA5F6DDCCEB8|YtoP], according to UniProt)

    • Structure

  • [PDB|2GRE] (from ''Bacillus Cereus'', 71% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|EDD5ACB89661D3B6D77057863EF345EBF84F49B2|yhfE]-[gene|A666F376947A675E04550338C3177FF8AFF44DF4|yhfF]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A710 (yhfE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/710 NBRP B. subtilis, Japan]
  • BKE10200 (Δ[gene|EDD5ACB89661D3B6D77057863EF345EBF84F49B2|yhfE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGGGCATTCCTCCTTTT, downstream forward: _UP4_CCAATGGTATAAGGGGGAGG
  • BKK10200 (Δ[gene|EDD5ACB89661D3B6D77057863EF345EBF84F49B2|yhfE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGGGCATTCCTCCTTTT, downstream forward: _UP4_CCAATGGTATAAGGGGGAGG